django-mogi views

class mogi.views.views_annotations.CombinedAnnotationListView(**kwargs)

get_context_data(**kwargs)

Overridden version of .TemplateResponseMixin to inject the table into the template’s context.

get_filterset_kwargs(filterset_class)

Returns the keyword arguments for instantiating the filterset.

get_table_data()

Return the table data that should be used to populate the rows.

model

alias of CombinedAnnotation

table_class

alias of CombinedAnnotationTable

class mogi.views.views_annotations.MetFragListView(**kwargs)

get_context_data(**kwargs)

Overridden version of .TemplateResponseMixin to inject the table into the template’s context.

get_table_data()

Return the table data that should be used to populate the rows.

model

alias of MetFrag

table_class

alias of MetFragTable

class mogi.views.views_annotations.SMPlotView(**kwargs)

class mogi.views.views_annotations.SiriusCSIFingerIDListView(**kwargs)

get_context_data(**kwargs)

Overridden version of .TemplateResponseMixin to inject the table into the template’s context.

get_table_data()

Return the table data that should be used to populate the rows.

model

alias of SiriusCSIFingerID

table_class

alias of SiriusCSIFingerIDTable

class mogi.views.views_annotations.SpectralMatchingListView(**kwargs)

get_context_data(**kwargs)

Overridden version of .TemplateResponseMixin to inject the table into the template’s context.

get_table_data()

Return the table data that should be used to populate the rows.

model

alias of SpectralMatching

table_class

alias of SpectralMatchingTable

class mogi.views.views_compounds.CompoundListView(**kwargs)

get_filterset_kwargs(filterset_class)

Returns the keyword arguments for instantiating the filterset.

model

alias of Compound

table_class

alias of CompoundTable

class mogi.views.views_compounds.UploadCompounds(**kwargs)

form_class

alias of UploadCompoundsForm

form_valid(form)

If the form is valid, save the associated model.

model

alias of UploadCompounds

class mogi.views.views_datasets.DatasetListView(**kwargs)

get_filterset_kwargs(filterset_class)

Returns the keyword arguments for instantiating the filterset.

model

alias of Dataset

table_class

alias of ResultsDataTable

class mogi.views.views_datasets.UploadDatasetsView(**kwargs)

form_class

alias of UploadDatasetsForm

form_valid(form)

If the form is valid, save the associated model.

model

alias of UploadDatasets

class mogi.views.views_galaxy.GalaxyISAupload(**kwargs)

form_class

alias of ISAtoGalaxyParamForm

table_class

alias of InvestigationTableUpload

class mogi.views.views_galaxy.ISAFileSelectToGalaxyDataLib(**kwargs)

filterset_class

alias of ISAFileFilter

table_class

alias of ISAFileSelectTableWithCheckBox

class mogi.views.views_galaxy.ISAFileSelectToGalaxyHist(**kwargs)

filterset_class

alias of ISAFileFilter

table_class

alias of ISAFileSelectTableWithCheckBox

class mogi.views.views_galaxy.ISAWorkflowListView(**kwargs)

table_class

alias of WorkflowTableISA

class mogi.views.views_galaxy.ISAWorkflowRunView(**kwargs)

Run a registered workflow

filter_class

alias of ISAFileFilter

form_class

alias of ISAWorkflowRunForm

table_class

alias of ISAFileSelectTable

class mogi.views.views_galaxy.IncomingGalaxyDataListView(**kwargs)

model

alias of IncomingGalaxyData

table_class

alias of IncomingGalaxyDataTable

class mogi.views.views_galaxy.IncomingGalaxyDataViewSet(**kwargs)

serializer_class

alias of IncomingGalaxyDataSerializer

class mogi.views.views_general.DataAndResultsSummaryView(**kwargs)

class mogi.views.views_isa.AddOntologyTermView(**kwargs)

form_class

alias of OntologyTermForm

get_initial()

Return the initial data to use for forms on this view.

model

alias of OntologyTerm

class mogi.views.views_isa.AssayAutocomplete(**kwargs)

model_class

alias of Assay

class mogi.views.views_isa.AssayCreateView(**kwargs)

form_class

alias of AssayForm

model

alias of Assay

class mogi.views.views_isa.AssayDeleteView(**kwargs)

model

alias of Assay

class mogi.views.views_isa.AssayDetailSummaryView(**kwargs)

class mogi.views.views_isa.AssayFileSummaryView(**kwargs)

class mogi.views.views_isa.AssayUpdateView(**kwargs)

model

alias of Assay

class mogi.views.views_isa.AutoCompleteWithUserPermissions(**kwargs)

get_queryset()

Filter the queryset with GET[‘q’].

class mogi.views.views_isa.ChromatographyProtocolCreateView(**kwargs)

form_class

alias of ChromatographyProtocolForm

model

alias of ChromatographyProtocol

class mogi.views.views_isa.ChromatographyProtocolDeleteView(**kwargs)

model

alias of ChromatographyProtocol

class mogi.views.views_isa.ChromatographyProtocolListView(**kwargs)

model

alias of ChromatographyProtocol

table_class

alias of ChromatographyProtocolTable

class mogi.views.views_isa.ChromatographyProtocolUpdateView(**kwargs)

form_class

alias of ChromatographyProtocolForm

model

alias of ChromatographyProtocol

class mogi.views.views_isa.ChromatographyTypeAutocomplete(**kwargs)

model_class

alias of ChromatographyType

class mogi.views.views_isa.ChromatographyTypeCreateView(**kwargs)

form_class

alias of ChromatographyTypeForm

model

alias of ChromatographyType

class mogi.views.views_isa.ChromatographyTypeDeleteView(**kwargs)

model

alias of ChromatographyType

class mogi.views.views_isa.ChromatographyTypeListView(**kwargs)

model

alias of ChromatographyType

table_class

alias of ChromatographyTypeTable

class mogi.views.views_isa.ChromatographyTypeUpdateView(**kwargs)

form_class

alias of ChromatographyTypeForm

model

alias of ChromatographyType

class mogi.views.views_isa.DataTransformationProtocolCreateView(**kwargs)

form_class

alias of DataTransformationProtocolForm

model

alias of DataTransformationProtocol

class mogi.views.views_isa.DataTransformationProtocolDeleteView(**kwargs)

model

alias of DataTransformationProtocol

class mogi.views.views_isa.DataTransformationProtocolListView(**kwargs)

model

alias of DataTransformationProtocol

table_class

alias of DataTransformationProtocolTable

class mogi.views.views_isa.DataTransformationProtocolUpdateView(**kwargs)

form_class

alias of DataTransformationProtocolForm

model

alias of DataTransformationProtocol

class mogi.views.views_isa.ExportISACreateView(**kwargs)

form_class

alias of ExportISAForm

form_valid(form)

If the form is valid, save the associated model.

model

alias of ExportISA

class mogi.views.views_isa.ExtractionProtocolCreateView(**kwargs)

form_class

alias of ExtractionProtocolForm

model

alias of ExtractionProtocol

class mogi.views.views_isa.ExtractionProtocolDeleteView(**kwargs)

model

alias of ExtractionProtocol

class mogi.views.views_isa.ExtractionProtocolListView(**kwargs)

model

alias of ExtractionProtocol

table_class

alias of ExtractionProtocolTable

class mogi.views.views_isa.ExtractionProtocolUpdateView(**kwargs)

form_class

alias of ExtractionProtocolForm

model

alias of ExtractionProtocol

class mogi.views.views_isa.ExtractionTypeAutocomplete(**kwargs)

model_class

alias of ExtractionType

class mogi.views.views_isa.ExtractionTypeCreateView(**kwargs)

form_class

alias of ExtractionTypeForm

model

alias of ExtractionType

class mogi.views.views_isa.ExtractionTypeDeleteView(**kwargs)

model

alias of ExtractionType

class mogi.views.views_isa.ExtractionTypeListView(**kwargs)

model

alias of ExtractionType

table_class

alias of ExtractionTypeTable

class mogi.views.views_isa.ExtractionTypeUpdateView(**kwargs)

form_class

alias of ExtractionTypeForm

model

alias of ExtractionType

class mogi.views.views_isa.ISABatchCreate(**kwargs)

class mogi.views.views_isa.ISAFileSummaryView(**kwargs)

View and initiate a run for all registered workflows.

Workflows can also be synced here as well

model

alias of GenericFile

table_class

alias of ISAFileSelectTable

class mogi.views.views_isa.ISAJsonExport(**kwargs)

class mogi.views.views_isa.ISAListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of Investigation

table_class

alias of InvestigationTable

class mogi.views.views_isa.ISAOperatorMixin

model

alias of Run

class mogi.views.views_isa.InvestigationAutocomplete(**kwargs)

model_class

alias of Investigation

class mogi.views.views_isa.InvestigationCreateView(**kwargs)

form_class

alias of InvestigationForm

model

alias of Investigation

class mogi.views.views_isa.InvestigationDeleteView(**kwargs)

model

alias of Investigation

class mogi.views.views_isa.InvestigationDetailTablesView(**kwargs)

Run a registered workflow

class mogi.views.views_isa.InvestigationListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of Investigation

table_class

alias of InvestigationTable

class mogi.views.views_isa.InvestigationListViewOLD(**kwargs)

get_context_data(**kwargs)

Overridden version of .TemplateResponseMixin to inject the table into the template’s context.

model

alias of Investigation

class mogi.views.views_isa.InvestigationUpdateView(**kwargs)

form_class

alias of InvestigationForm

model

alias of Investigation

class mogi.views.views_isa.MFileAutocomplete(**kwargs)

get_queryset()

Filter the queryset with GET[‘q’].

class mogi.views.views_isa.MFileCreateView(**kwargs)

form_class

alias of MFileForm

form_valid(form)

If the form is valid, save the associated model.

model

alias of MFile

class mogi.views.views_isa.MFileListView(**kwargs)

filterset_class

alias of ISAFileFilter

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of MFile

table_class

alias of AssayFileTable

class mogi.views.views_isa.MeasurementProtocolCreateView(**kwargs)

form_class

alias of MeasurementProtocolForm

model

alias of MeasurementProtocol

class mogi.views.views_isa.MeasurementProtocolDeleteView(**kwargs)

model

alias of MeasurementProtocol

class mogi.views.views_isa.MeasurementProtocolListView(**kwargs)

model

alias of MeasurementProtocol

table_class

alias of MeasurementProtocolTable

class mogi.views.views_isa.MeasurementProtocolUpdateView(**kwargs)

form_class

alias of MeasurementProtocolForm

model

alias of MeasurementProtocol

class mogi.views.views_isa.MeasurementTechniqueAutocomplete(**kwargs)

model_class

alias of MeasurementTechnique

class mogi.views.views_isa.MeasurementTechniqueCreateView(**kwargs)

form_class

alias of MeasurementTechniqueForm

model

alias of MeasurementTechnique

class mogi.views.views_isa.MeasurementTechniqueDeleteView(**kwargs)

model

alias of MeasurementTechnique

class mogi.views.views_isa.MeasurementTechniqueListView(**kwargs)

model

alias of MeasurementTechnique

table_class

alias of MeasurementTechniqueTable

class mogi.views.views_isa.MeasurementTechniqueUpdateView(**kwargs)

form_class

alias of MeasurementTechniqueForm

model

alias of MeasurementTechnique

class mogi.views.views_isa.OntologyTermAutocomplete(**kwargs)

model_class

alias of OntologyTerm

class mogi.views.views_isa.OntologyTermCreateView(**kwargs)

form_class

alias of OntologyTermForm

model

alias of OntologyTerm

class mogi.views.views_isa.OntologyTermDeleteView(**kwargs)

model

alias of OntologyTerm

class mogi.views.views_isa.OntologyTermListView(**kwargs)

model

alias of OntologyTerm

table_class

alias of OntologyTermTableLocal

class mogi.views.views_isa.OntologyTermSearchResultView(**kwargs)

class mogi.views.views_isa.OntologyTermSearchView(**kwargs)

class mogi.views.views_isa.OntologyTermUpdateView(**kwargs)

form_class

alias of OntologyTermForm

model

alias of OntologyTerm

class mogi.views.views_isa.OrganismAutocomplete(**kwargs)

model_class

alias of Organism

class mogi.views.views_isa.OrganismCreateView(**kwargs)

form_class

alias of OrganismForm

model

alias of Organism

class mogi.views.views_isa.OrganismDeleteView(**kwargs)

model

alias of Organism

class mogi.views.views_isa.OrganismListView(**kwargs)

model

alias of Organism

table_class

alias of OrganismTable

class mogi.views.views_isa.OrganismPartAutocomplete(**kwargs)

model_class

alias of OrganismPart

class mogi.views.views_isa.OrganismPartCreateView(**kwargs)

form_class

alias of OrganismPartForm

model

alias of OrganismPart

class mogi.views.views_isa.OrganismPartDeleteView(**kwargs)

model

alias of OrganismPart

class mogi.views.views_isa.OrganismPartListView(**kwargs)

model

alias of OrganismPart

table_class

alias of OrganismPartTable

class mogi.views.views_isa.OrganismPartUpdateView(**kwargs)

form_class

alias of OrganismPartForm

model

alias of OrganismPart

class mogi.views.views_isa.OrganismUpdateView(**kwargs)

form_class

alias of OrganismForm

model

alias of Organism

class mogi.views.views_isa.PolarityTypeAutocomplete(**kwargs)

model_class

alias of PolarityType

class mogi.views.views_isa.RunCreateView(**kwargs)

form_class

alias of RunForm

model

alias of Run

class mogi.views.views_isa.SampleCollectionProtocolCreateView(**kwargs)

form_class

alias of SampleCollectionProtocolForm

model

alias of SampleCollectionProtocol

class mogi.views.views_isa.SampleCollectionProtocolDeleteView(**kwargs)

model

alias of SampleCollectionProtocol

class mogi.views.views_isa.SampleCollectionProtocolListView(**kwargs)

model

alias of SampleCollectionProtocol

table_class

alias of SampleCollectionProtocolTable

class mogi.views.views_isa.SampleCollectionProtocolUpdateView(**kwargs)

form_class

alias of SampleCollectionProtocolForm

model

alias of SampleCollectionProtocol

class mogi.views.views_isa.SampleTypeAutocomplete(**kwargs)

model_class

alias of SampleType

class mogi.views.views_isa.SpeProtocolCreateView(**kwargs)

form_class

alias of SpeProtocolForm

model

alias of SpeProtocol

class mogi.views.views_isa.SpeProtocolDeleteView(**kwargs)

model

alias of SpeProtocol

class mogi.views.views_isa.SpeProtocolListView(**kwargs)

model

alias of SpeProtocol

table_class

alias of SpeProtocolTable

class mogi.views.views_isa.SpeProtocolUpdateView(**kwargs)

form_class

alias of SpeProtocolForm

model

alias of SpeProtocol

class mogi.views.views_isa.SpeTypeAutocomplete(**kwargs)

model_class

alias of SpeType

class mogi.views.views_isa.SpeTypeCreateView(**kwargs)

form_class

alias of SpeTypeForm

model

alias of SpeType

class mogi.views.views_isa.SpeTypeDeleteView(**kwargs)

model

alias of SpeType

class mogi.views.views_isa.SpeTypeListView(**kwargs)

model

alias of SpeType

table_class

alias of SpeTypeTable

class mogi.views.views_isa.SpeTypeUpdateView(**kwargs)

form_class

alias of SpeTypeForm

model

alias of SpeType

class mogi.views.views_isa.StudyAutocomplete(**kwargs)

model_class

alias of Study

class mogi.views.views_isa.StudyCreateView(**kwargs)

form_class

alias of StudyForm

model

alias of Study

class mogi.views.views_isa.StudyDeleteView(**kwargs)

model

alias of Study

class mogi.views.views_isa.StudyFactorAutocomplete(**kwargs)

model_class

alias of StudyFactor

class mogi.views.views_isa.StudyFactorCreateView(**kwargs)

form_class

alias of StudyFactorForm

model

alias of StudyFactor

class mogi.views.views_isa.StudyFactorDeleteView(**kwargs)

model

alias of StudyFactor

class mogi.views.views_isa.StudyFactorListView(**kwargs)

model

alias of StudyFactor

table_class

alias of StudyFactorTable

class mogi.views.views_isa.StudyFactorUpdateView(**kwargs)

form_class

alias of StudyFactorForm

model

alias of StudyFactor

class mogi.views.views_isa.StudySampleBatchCreate(**kwargs)

class mogi.views.views_isa.StudySampleCreateView(**kwargs)

form_class

alias of StudySampleForm

model

alias of StudySample

class mogi.views.views_isa.StudySampleDeleteView(**kwargs)

model

alias of StudySample

class mogi.views.views_isa.StudySampleListView(**kwargs)

model

alias of StudySample

table_class

alias of StudySampleTable

class mogi.views.views_isa.StudySampleUpdateView(**kwargs)

form_class

alias of StudySampleForm

model

alias of StudySample

class mogi.views.views_isa.StudyUpdateView(**kwargs)

form_class

alias of StudyForm

model

alias of Study

class mogi.views.views_isa.UploadAssayDataFilesView(**kwargs)

class mogi.views.views_isa.UploadMFilesBatch(**kwargs)

class mogi.views.views_peaks.EicView(**kwargs)

class mogi.views.views_peaks.SPeakView(**kwargs)

class mogi.views.views_search.SearchFragParamCreateView(**kwargs)

form_class

alias of SearchFragParamForm

form_valid(form)

If the form is valid, save the associated model.

get_initial()

Return the initial data to use for forms on this view.

model

alias of SearchFragParam

class mogi.views.views_search.SearchFragParamListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of SearchFragParam

table_class

alias of SearchFragParamTable

class mogi.views.views_search.SearchFragResultAnnotationListView(**kwargs)

get_tables()

Return an array of table instances containing data.

model

alias of CombinedAnnotation

class mogi.views.views_search.SearchFragResultListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of SearchFragResult

table_class

alias of SearchFragResultTable

class mogi.views.views_search.SearchMonoParamCreateView(**kwargs)

form_class

alias of SearchMonoParamForm

form_valid(form)

If the form is valid, save the associated model.

get_initial()

Return the initial data to use for forms on this view.

model

alias of SearchMonoParam

class mogi.views.views_search.SearchMonoParamListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of SearchMonoParam

table_class

alias of SearchMonoParamTable

class mogi.views.views_search.SearchMonoResultListView(**kwargs)

get_queryset()

Return the list of items for this view.

The return value must be an iterable and may be an instance of QuerySet in which case QuerySet specific behavior will be enabled.

model

alias of SearchMonoResult

table_class

alias of SearchMonoResultTable

class mogi.views.views_search.SearchMzParamCreateView(**kwargs)

form_class

alias of SearchMzParamForm

form_valid(form)

If the form is valid, save the associated model.

model

alias of SearchMzParam