.. _django-mogi:

django-mogi
========================================

Metabolomics organisation with Galaxy and ISA.

For current code and updates, use `computational-metabolomics/django-mogi <https://github.com/computational-metabolomics/django-mogi>`_.

API Reference
-------------

.. toctree::
   :maxdepth: 2

    API Modules <api/index.rst>


Setup
-----

1. Add "mogi" and django application dependencies to your INSTALLED_APPS setting like this (mogi should come before gfiles and galaxy)::


    INSTALLED_APPS = [
        ...
        'mogi',
        'galaxy',
        'gfiles',

        'django_tables2',
        'django_tables2_column_shifter',
        'django_filters',
        'bootstrap3',
        'django_sb_admin',
        'dal',
        'dal_select2',
    ]

2. Include the URLconf in your project urls.py like this::


    url(r'^', include('gfiles.urls')),
    url('mogi/', include('mogi.urls')),
    url('galaxy/', include('galaxy.urls')),


3. Run `python manage.py migrate` to create the mogi models.

4. Start the development server and visit http://127.0.0.1:8000/